{"studyId":"brca_tcga_pan_can_atlas_2018","cancerTypeId":"brca","name":"Breast Invasive Carcinoma (TCGA, PanCancer Atlas)","description":"Breast Invasive Carcinoma TCGA PanCancer data. The original data is <a href=\"https://gdc.cancer.gov/about-data/publications/pancanatlas\">here</a>. The publications are <a href=\"https://www.cell.com/pb-assets/consortium/pancanceratlas/pancani3/index.html\">here</a>.","publicStudy":true,"pmid":"29625048,29596782,29622463,29617662,29625055,29625050,29617662,30643250,32214244,29625049,29850653,36334560","citation":"TCGA, Cell 2018","groups":"PUBLIC;PANCAN","status":0,"importDate":"2026-06-05 15:34:03","allSampleCount":1084,"sequencedSampleCount":1066,"cnaSampleCount":1070,"mrnaRnaSeqSampleCount":0,"mrnaRnaSeqV2SampleCount":1082,"mrnaMicroarraySampleCount":0,"miRnaSampleCount":0,"methylationHm27SampleCount":0,"rppaSampleCount":876,"massSpectrometrySampleCount":105,"completeSampleCount":994,"referenceGenome":"hg19","treatmentCount":790,"structuralVariantCount":852,"cancerType":{"id":"brca","name":"Invasive Breast Carcinoma","dedicatedColor":"HotPink","shortName":"BRCA","parent":"breast"},"readPermission":true,"resourceCounts":[{"resourceId":"IDC_OHIF_MG","displayName":"Mammography","description":"Mammography","resourceType":"PATIENT","priority":"1","openByDefault":true,"cancerStudyIdentifier":"brca_tcga_pan_can_atlas_2018","sampleCount":5,"patientCount":5},{"resourceId":"IDC_OHIF_MR","displayName":"Magnetic Resonance","description":"Magnetic Resonance","resourceType":"PATIENT","priority":"1","openByDefault":true,"cancerStudyIdentifier":"brca_tcga_pan_can_atlas_2018","sampleCount":136,"patientCount":136},{"resourceId":"IDC_SLIM","displayName":"Slide Microscopy","description":"Slide Microscopy","resourceType":"PATIENT","priority":"1","openByDefault":true,"cancerStudyIdentifier":"brca_tcga_pan_can_atlas_2018","sampleCount":1084,"patientCount":1084}]}