DESeq2 · differential expression with RNA-seq
An R package for normalisation, dispersion and differential analysis of RNA-seq count data.
Conditions of use
Fix the package version, count matrix, metadata, replicates and experimental design before execution.
Limits and context
Do not automatically treat TPM/FPKM as raw counts; ELUCENIA has not run the package or its vignette.
Catalogued source record. Implementation on ELUCENIA and independent scientific review pending.
Relationship with cancer research
Support for research — context required
A resource relevant to the research pathway; applicability depends on the defined study, data and method. There is no local integration.
Applications: Genomics · Biomarkers